MCRO06009 2019 Agricultural and Food Microbiology
The aim of this module is to introduce students to the relevance and importance of microorganisms in both the agricultural and food sectors.
Learning Outcomes
On completion of this module the learner will/should be able to;
Explain the effects of both extrinsic and intrinsic factors on the growth of microorganisms in foodstuffs.
Describe the characteristics of food borne pathogens and discuss the control methods available to limit their growth
Review microbial fermentations and air bioflora and evaluate their importance in the agri-food sector
Appraise zoonotic diseases, pest control and hygienic food production
Enumerate microorganisms in a selection of food, drinking water and soil samples and monitor surfaces , personnel and air for microbial contaminants- with emphasis on emerging rapid methods
Teaching and Learning Strategies
This module will be delivered by lecturers, enquiry based learning sessions and laboratory activities. All topics will be available on Moodle as will an extensive amount of additional relevant information
Module Assessment Strategies
This module is 70% continuous assessment and 30% final exam.
To assess the learning outcomes the students will be tested on the theory covered by short question tests and final theory examination.
The laboratory activities will be assessed on an ongoing basis by short question examinations, electronically uploaded laboratory reports and the periodic testing of practical laboratory skills acquired.
The student must reach an assigned gate (mark) in the final exam and achieve 40% overall to pass the subject.
Repeat Assessments
Repeat final theory examinations will be available as will repeat C/A
Module Dependencies
Indicative Syllabus
Explain the effects of both extrinsic and intrinsic factors on the growth of microorganisms in foodstuffs
- Water activity
- pH
- Nutrients
- Biological barriers
- Antimicrobial chemicals
- Temperature / concentration of gases / relative humidity of storage area
Describe the characteristics of food borne pathogens and discuss the control methods available to limit their growth
- Bacterial infections
- Viral infections
- Food intoxications
- Methods of food preservation
- Inhibition principle
- Killing principle
Review microbial fermentation and air bioflora and evaluate their importance in the agri-food sector
- “Superfoods”
- Alcoholic fermentation
- Microbiology of silage
- Factors effecting air microflora
- Major diseases transmitted through air
- Evaluation of air quality
- Standards and limits for air quality
- Controlling air biohazards
Appraise zoonotic diseases and develop an understanding of pest control and hygienic food production methods
- Diseases passed from animas to man
- Methods of prevention and control
- Safe handling of foods
- Sources of contamination
- Pest control
- Waste management
Enumerate microorganisms in a selection of food, drinking water and soil samples and monitor surfaces, personnel and air for microbial contaminants- with emphasis on immerging rapid methods
Students will perform a range of laboratory tests that support module theory content
- Enumerating yeast cells using a haemocytometer slide
- Spread plate counts on raw and cooked meat samples
- Counting and microscopic examination of microbial contaminants in compost and soil samples
- Total viable counts on a selection of drinking water samples
- Analysis of water for faecal indicator bacteria
- Collection of organisms on surfaces and personnel using swab and contact plate techniques
- Air analysis for bacterial and fungal organisms
Coursework & Assessment Breakdown
Coursework Assessment
Title | Type | Form | Percent | Week | Learning Outcomes Assessed | |
---|---|---|---|---|---|---|
1 | Short Answer Questions Theory | Coursework Assessment | Closed Book Exam | 10 % | Week 8 | 1,2 |
2 | Short Answer Questions Theory | Coursework Assessment | Closed Book Exam | 10 % | Week 12 | 3,4 |
3 | Written Report /Laboratory Notebook | Practical | Written Report/Essay | 30 % | OnGoing | 5 |
4 | Short Answer Questions Laboratory | Coursework Assessment | Practical Evaluation | 10 % | Week 9 | 5 |
5 | Short Answer Questions Laboratory | Coursework Assessment | Practical Evaluation | 10 % | Week 13 | 5 |
End of Semester / Year Assessment
Title | Type | Form | Percent | Week | Learning Outcomes Assessed | |
---|---|---|---|---|---|---|
1 | Final Theory | Final Exam | Closed Book Exam | 30 % | End of Semester | 1,2,3,4 |
Full Time Mode Workload
Type | Location | Description | Hours | Frequency | Avg Workload |
---|---|---|---|---|---|
Lecture | Lecture Theatre | Lecture | 2 | Weekly | 2.00 |
Practical / Laboratory | Science Laboratory | Practical | 2 | Weekly | 2.00 |
Independent Learning | Not Specified | Independent Learning | 3 | Weekly | 3.00 |
Module Resources
Aneja K. (2018). Modern Food Microbiology. Medtech. New Gloster, USA
Dubey R, Maheshwar D.( 2010). Practical Microbiology. 1st edn. S Chand & Co Ltd. India
Glazer, Alexander N, NikaidÅ H. (2007). Microbial Biotechnology. 2nd edn. Cambridge University Press.Cambridge, England
Hofkin B, (2010). Living in a microbial world. 1st edn. Garland Science Publishers.New York, USA.
Madigan M, Martinko J, Stahl D, Clark D,( 2011). Brock Biology of Microorganisms. 13th edn. Benjamin Cummings Publishers. San Francisco, USA
Maier R, Pepper I, Gerba C, 2008. Environmentsal Microbiology. 2nd edn. Academic Press Publishers. Cambridge, Massachusetts.
Martin A, Moss M, McClure P. (2015).Food Microbiology.4th edn. Royal Society of Chemistry. England
Prabakaran G. (2010). Introduction to soil and agricultural microbiology. Himalaya Pub. House. India
Prescott L, Harley J, Klein D, (2004). Microbiology. 6th edn. McGraw-Hill Higher Education.New York, USA
Slonczewski J, Foster J, (2017). Microbiology: An Evolving Science.4thedn. W. W. Norton & Company. New York. USA.
Strelkauskas A, StrelkauskasJ, Moszyk- Strelkauskas D, 2009. Microbiology: A Clinical Approach. 1st edn. Garland Science. USA.
Tortora G, Berdell R, Case C, Weber D, Warner B. (2018). Microbiology an Introduction. 13th edn. Pearson. New York, USA.
Whellis M, (2007). Principles of Modern Microbiology. 1st edn. Jones and Bartlett.Boston. USA.
Willey J, Sherwood L, Woolverton C, (2013). Prescott's Microbiology. 9th edn. McGraw-Hill Science. San Diego.USA.
International Journal of Microbiology
Annual review of Microbiology
Nature Microbiology
Microbiome
Laboratory manuals
Moodle site
Lecture notes and handouts